Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890751.1_cds_XP_016445443.1_40400
CDS Infomation

[gene=LOC107770634] [db_xref=GeneID:107770634] [protein=non-specific phospholipase C4-like] [protein_id=XP_016445443.1] [location=complement(join(23385..23731,24353..24523,25246..25658,30336..30494,30814..31289))] [gbkey=CDS]
Sequence

ATGGCATCTTCAGAAACATCAAAACCTTCATTTCCCATTAAAACAGTAATAGTTTTAGTT
CAAGAAAATCGCTCATTTGATCACATGTTAGGTTGGATGAATACCCTAAACCCAGAAATC
ACTGGCCCAACAATAGGAAAAGAATCCAACCCAATATCCACCTCGAACCAAAATTCCAGT
CTCGTTTACTTCGGAAACAATTCCCTTTACGTAGACCAAGATCCAGGCCATTCAATCCAA
GACATTTATGAACAAATATTTGGGGTCCCATGGAGTCAAGACTTGGCTAACAAGAAACTT
GAACCCGCCATGAAAGGATTTGCTCAAAATGCAGAGAGAAATCAAAAGGGTATGGCGGAA
ACTGTTATGAACGGGTTTAAACCTGCTGCTGTGCCTGTTTACAAAGAGCTTGTGACGGAG
TTCGCCGTTTGTGATCGGTGGTTCGCGTCCGTTCCGGCATCAACCCAACCCAACAGGTTG
TTTGTGCATTCGGCGACGTCACATGGGCTTACCAGTAATGATACAAAGCTGTTGATTCAT
GGATTACCTCAGAAGACTATATTTGATTCAATGGATGAGGCTGGCTATTCTTTTGGTATT
TACTATCAATACCCTCCGTCCACTCTTTTTTACAGGAATCTTAGGAAACTGAAATACATA
AAGAATTTTCATCCGTTCGATCTAAGCTTCAAAAATCACTGCAAGGAGGGAAAGCTACCA
AATTATGTAGTAATTGAACCAAGATTTTATGACTTAAAAGTGTTGCCAGGGAATGATGAT
CACCCATCGCACGATGTATTTGAAGGGCAAAAATTCGTGAAAGAAGTGTACGAGGCGTTG
AGATCAAGCCCTCAATGGAATGAAATGCTTTTCATAATAATATACGATGAACATGGTGGT
TTCTTTGACCATGTGCCAACTCCGGTCACCGGAGTTCCCAGCCCCGACGGTATTGTGGGT
ACCACTGCGCCTTATAACTTTCAGTTTGATCGCCTCGGTGTTAGGGTTCCGGCGATCATG
ATTTCTCCATGGATTGAAAGAGGAACAGTGTTGCATAAGCCATCAGGACCATATGCTACT
TCTGAATTTGAGCATTCTTCAATTCCTGCAACTGTTAAGAAGATTTTTAATTTGGATGAG
TTCCTAACTAAACGTGATGCATGGGCTGGTACCTTTGAGACTGTCATAACCAGATCAACC
CCAAGAACAGACTGCCCTGAAACTTTACCAGAACCAGTAAGAATGAGAGAGGCAGAAGCA
CAAGAAGAGGCAAAGTTAACAGAGTTTCAAGCAGAAATGGTACAAATGTCAGCAGTATTA
TGTGGAGATTATATGAACAAGTCTTATCCCAACAAGCTTGTGGAGGGAATGACTGTTGCT
AAGGCAGCTGATTATGTTCATAATGCATTCAAGAAATTCTTGGATGAAGGTGAAAAAGCC
ATACAAAGTGGTGCACATGAGTCTACTATCTTAATACCAAGAGATCAATTACTAGCTGAG
AGAGCTCCAAGAAAATCCAAATCCTTTGCTTCCAAATTCTTTTCTTGTATAGTTTGTGAT
CATTGA

Peptide Sequence

PEP ID

XP_016445443.1
PEP Infomation

PREDICTED: non-specific phospholipase C4-like [Nicotiana tabacum]
Sequence

MASSETSKPSFPIKTVIVLVQENRSFDHMLGWMNTLNPEITGPTIGKESNPISTSNQNSS
LVYFGNNSLYVDQDPGHSIQDIYEQIFGVPWSQDLANKKLEPAMKGFAQNAERNQKGMAE
TVMNGFKPAAVPVYKELVTEFAVCDRWFASVPASTQPNRLFVHSATSHGLTSNDTKLLIH
GLPQKTIFDSMDEAGYSFGIYYQYPPSTLFYRNLRKLKYIKNFHPFDLSFKNHCKEGKLP
NYVVIEPRFYDLKVLPGNDDHPSHDVFEGQKFVKEVYEALRSSPQWNEMLFIIIYDEHGG
FFDHVPTPVTGVPSPDGIVGTTAPYNFQFDRLGVRVPAIMISPWIERGTVLHKPSGPYAT
SEFEHSSIPATVKKIFNLDEFLTKRDAWAGTFETVITRSTPRTDCPETLPEPVRMREAEA
QEEAKLTEFQAEMVQMSAVLCGDYMNKSYPNKLVEGMTVAKAADYVHNAFKKFLDEGEKA
IQSGAHESTILIPRDQLLAERAPRKSKSFASKFFSCIVCDH

Transcript Sequence

Gene sequence data has not been registered.